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Examples Gallery

Use these examples as entry points for correctness checks, scalability experiments, and real-world genotype studies.

ExamplePurposeDataCommandExpected output
Tiny correctnessValidate federated QC, KING, and LR against a centralized baseline.Synthetic tiny PLINK data, 500 samples and 5,000 SNPs.flwr run . local-simulation --streamResults under experiments/correctness/tiny_even/results_2/ and evaluation reports.
Performance smallMeasure runtime and memory at small scale.Synthetic small PLINK data, 2,000 samples and 20,000 SNPs.Cluster scripts or Flower local deployment with performance/small_even configs.Stage metrics, client metrics, and run_summary.md.
1000 GenomesRun the application workflow on real chr22 genotypes with generated phenotypes.Prepared 1000 Genomes subset.Override config_path to experiments/real_world/1000genomes/configs.Federated outputs, baseline comparisons, and manuscript artifacts when generated.