Examples Gallery
Use these examples as entry points for correctness checks, scalability experiments, and real-world genotype studies.
| Example | Purpose | Data | Command | Expected output |
|---|---|---|---|---|
| Tiny correctness | Validate federated QC, KING, and LR against a centralized baseline. | Synthetic tiny PLINK data, 500 samples and 5,000 SNPs. | flwr run . local-simulation --stream | Results under experiments/correctness/tiny_even/results_2/ and evaluation reports. |
| Performance small | Measure runtime and memory at small scale. | Synthetic small PLINK data, 2,000 samples and 20,000 SNPs. | Cluster scripts or Flower local deployment with performance/small_even configs. | Stage metrics, client metrics, and run_summary.md. |
| 1000 Genomes | Run the application workflow on real chr22 genotypes with generated phenotypes. | Prepared 1000 Genomes subset. | Override config_path to experiments/real_world/1000genomes/configs. | Federated outputs, baseline comparisons, and manuscript artifacts when generated. |